3TV7 Transferase Transferase Inhibitor date Sep 19, 2011
title Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex Wi
authors M.P.Martin, J.Y.Zhu, E.Schonbrunn
compound source
Molecule: Rho-Associated Protein Kinase 1
Chain: A, B, C, D
Fragment: N-Terminal Kinase Domain, Residue 6-415
Synonym: Renal Carcinoma Antigen Ny-Ren-35, Rho-Associated, Coil-Containing Protein Kinase 1, P160 Rock-1, P160rock;
Ec: 2.7.11.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Rock1
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
Expression_system_vector_type: Baculovirus
Expression_system_plasmid: Pfb-Dual-Pbl
symmetry Space Group: C 2 2 21
R_factor 0.206 R_Free 0.253
crystal
cell
length a length b length c angle alpha angle beta angle gamma
151.010 150.920 185.570 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.75 Å
ligand 07Q, EDO enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referencePyridylthiazole-based ureas as inhibitors of Rho associated protein kinases (ROCK1 and 2)., Pireddu R, Forinash KD, Sun NN, Martin MP, Sung SS, Alexander B, Zhu JY, Guida WC, Schonbrunn E, Sebti SM, Lawrence NJ, Medchemcomm. 2012 Jun 1;3(6):699-709. Epub 2012 Jan 27. PMID:23275831
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (267 Kb) [Save to disk]
  • Biological Unit Coordinates (3tv7.pdb1.gz) 132 Kb
  • Biological Unit Coordinates (3tv7.pdb2.gz) 133 Kb
  • LPC: Ligand-Protein Contacts for 3TV7
  • CSU: Contacts of Structural Units for 3TV7
  • Structure Factors (455 Kb)
  • Retrieve 3TV7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3TV7 from S2C, [Save to disk]
  • Re-refined 3tv7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3TV7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3TV7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3TV7, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3tv7_C] [3tv7] [3tv7_B] [3tv7_D] [3tv7_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 3TV7: [S_TK_X] [S_TKc ] by SMART
  • Other resources with information on 3TV7
  • Community annotation for 3TV7 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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