3TWR Signaling Protein Peptide date Sep 22, 2011
title Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex Peptide From Human 3bp2
authors S.Guettler, F.Sicheri
compound source
Molecule: Tankyrase-2
Chain: A, B, C, D
Fragment: Unp Residues 484-649
Synonym: Tank2, Poly [Adp-Ribose] Polymerase 5b, Tnks-2, Tr Interacting Ankyrin-Related Adp-Ribose Polymerase 2, Tankyr Tankyrase-Like Protein, Tankyrase-Related Protein;
Ec: 2.4.2.30
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Parp5b, Tank2, Tnkl, Tnks2
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21-Codonplus(De3)-Ril
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Petm-30

Molecule: Sh3 Domain-Binding Protein 2
Chain: E, F, G, H
Synonym: 3bp-2
Engineered: Yes

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Other_details: Solid-State Synthesized Peptide
symmetry Space Group: P 21 21 21
R_factor 0.181 R_Free 0.206
crystal
cell
length a length b length c angle alpha angle beta angle gamma
61.679 105.157 128.703 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.55 Å
ligand PE8, SET, SO4 enzyme Transferase E.C.2.4.2.30 BRENDA
Primary referenceStructural basis and sequence rules for substrate recognition by tankyrase explain the basis for cherubism disease., Guettler S, Larose J, Petsalaki E, Gish G, Scotter A, Pawson T, Rottapel R, Sicheri F, Cell. 2011 Dec 9;147(6):1340-54. PMID:22153077
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (250 Kb) [Save to disk]
  • Biological Unit Coordinates (3twr.pdb1.gz) 61 Kb
  • Biological Unit Coordinates (3twr.pdb2.gz) 62 Kb
  • Biological Unit Coordinates (3twr.pdb3.gz) 61 Kb
  • Biological Unit Coordinates (3twr.pdb4.gz) 62 Kb
  • LPC: Ligand-Protein Contacts for 3TWR
  • CSU: Contacts of Structural Units for 3TWR
  • Structure Factors (1719 Kb)
  • Retrieve 3TWR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3TWR from S2C, [Save to disk]
  • Re-refined 3twr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3TWR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3TWR
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3TWR, from MSDmotif at EBI
  • Fold representative 3twr from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3twr_G] [3twr_E] [3twr] [3twr_F] [3twr_D] [3twr_B] [3twr_H] [3twr_C] [3twr_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3TWR: [ANK ] by SMART
  • Other resources with information on 3TWR
  • Community annotation for 3TWR at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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