3TYL Oxidoreductase Oxidoreductase Inhibitor date Sep 26, 2011
title Structure Of Neuronal Nitric Oxide Synthase Heme Domain In C With 6-(((3s,4s)-4-(2-((2-Fluorobenzyl)Amino)Ethoxy)Pyrroli Methyl)-4-Methylpyridin-2-Amine
authors H.Li, T.L.Poulos
compound source
Molecule: Nitric Oxide Synthase, Brain
Chain: A, B
Fragment: Unp Residues 297-718
Synonym: Bnos, Constitutive Nos, Nc-Nos, Nos Type I, Neuron Nos, Nnos, Peptidyl-Cysteine S-Nitrosylase Nos1;
Ec: 1.14.13.39
Engineered: Yes
Organism_scientific: Rattus Norvegicus
Organism_common: Brown Rat,Rat,Rats
Organism_taxid: 10116
Gene: Nos1, Bnos
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pcwori
symmetry Space Group: P 21 21 21
R_factor 0.179 R_Free 0.212
crystal
cell
length a length b length c angle alpha angle beta angle gamma
51.931 110.806 164.294 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand ACT, AXW, H4B, HEM, ZN BindingDB enzyme Oxidoreductase E.C.1.14.13.39 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceIntramolecular hydrogen bonding: A potential strategy for more bioavailable inhibitors of neuronal nitric oxide synthase., Labby KJ, Xue F, Kraus JM, Ji H, Mataka J, Li H, Martasek P, Roman LJ, Poulos TL, Silverman RB, Bioorg Med Chem. 2012 Feb 7. PMID:22370337
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (294 Kb) [Save to disk]
  • Biological Unit Coordinates (3tyl.pdb1.gz) 288 Kb
  • LPC: Ligand-Protein Contacts for 3TYL
  • CSU: Contacts of Structural Units for 3TYL
  • Structure Factors (1093 Kb)
  • Retrieve 3TYL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3TYL from S2C, [Save to disk]
  • Re-refined 3tyl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3TYL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3TYL
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3TYL, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3tyl_B] [3tyl_A] [3tyl]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3TYL
  • Community annotation for 3TYL at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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