3U5S	Oxidoreductase	date	Oct 11, 2011
title	Selenium Substituted Human Augmenter Of Liver Regeneration
authors	M.Dong, B.J.Bahnson
compound		source
Molecule: Fad-Linked Sulfhydryl Oxidase Alr Chain: A Synonym: Augmenter Of Liver Regeneration, Herv1, Hepatopoie Ec: 1.8.3.2 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Gfer, Alr, Herv1, Hpo Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: C 2 2 21	R_factor 0.205 R_Free 0.244
crystal cell	length a length b length c angle alpha angle beta angle gamma 50.892 76.878 63.464 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.50 Å
ligand	FAD, MSE	enzyme	Oxidoreductase E.C.1.8.3.2 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	(77)Se Enrichment of Proteins Expands the Biological NMR Toolbox., Schaefer SA, Dong M, Rubenstein RP, Wilkie WA, Bahnson BJ, Thorpe C, Rozovsky S, J Mol Biol. 2012 Nov 15. pii: S0022-2836(12)00883-2. doi:, 10.1016/j.jmb.2012.11.011. PMID:23159557

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (30 Kb) [Save to disk] Biological Unit Coordinates (3u5s.pdb1.gz) 49 Kb LPC: Ligand-Protein Contacts for 3U5S CSU: Contacts of Structural Units for 3U5S Structure Factors (283 Kb) Retrieve 3U5S in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3U5S from S2C, [Save to disk] Re-refined 3u5s structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3U5S in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3U5S

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3U5S, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3u5s_A] [3u5s] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3U5S

Community annotation for 3U5S at PDBWiki (http://pdbwiki.org)

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