3UB1 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MSE, PEG enzyme
Gene PCW3
Primary referenceThe conjugation protein TcpC from Clostridium perfringens is structurally related to the type IV secretion system protein VirB8 from Gram-negative bacteria., Porter CJ, Bantwal R, Bannam TL, Rosado CJ, Pearce MC, Adams V, Lyras D, Whisstock JC, Rood JI, Mol Microbiol. 2012 Jan;83(2):275-88. doi:, 10.1111/j.1365-2958.2011.07930.x. Epub 2011 Dec 11. PMID:22150951
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (565 Kb) [Save to disk]
  • Biological Unit Coordinates (3ub1.pdb1.gz) 279 Kb
  • Biological Unit Coordinates (3ub1.pdb2.gz) 280 Kb
  • LPC: Ligand-Protein Contacts for 3UB1
  • CSU: Contacts of Structural Units for 3UB1
  • Structure Factors (9183 Kb)
  • Retrieve 3UB1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3UB1 from S2C, [Save to disk]
  • Re-refined 3ub1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3UB1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ub1] [3ub1_A] [3ub1_B] [3ub1_C] [3ub1_D] [3ub1_E] [3ub1_F]
  • SWISS-PROT database:

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science