3UBX date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 09N, NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, E


Primary referenceStructural basis for the recognition of C20:2-alphaGalCer by the invariant natural killer T cell receptor-like antibody L363., Yu ED, Girardi E, Wang J, Mac TT, Yu KO, Van Calenbergh S, Porcelli SA, Zajonc DM, J Biol Chem. 2012 Jan 6;287(2):1269-78. Epub 2011 Nov 22. PMID:22110136
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (546 Kb) [Save to disk]
  • Biological Unit Coordinates (3ubx.pdb1.gz) 271 Kb
  • Biological Unit Coordinates (3ubx.pdb2.gz) 271 Kb
  • LPC: Ligand-Protein Contacts for 3UBX
  • CSU: Contacts of Structural Units for 3UBX
  • Structure Factors (893 Kb)
  • Retrieve 3UBX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3UBX from S2C, [Save to disk]
  • Re-refined 3ubx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3UBX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ubx] [3ubx_A] [3ubx_B] [3ubx_D] [3ubx_E] [3ubx_G] [3ubx_H] [3ubx_I] [3ubx_L]
  • SWISS-PROT database:
  • Domains found in 3UBX: [IG_like] [IGc1] [IGv ] by SMART

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