3UCM Lyase Lyase Inhibitor date Oct 27, 2011
title Coccomyxa Beta-Carbonic Anhydrase In Complex With Thiocyanat
authors S.Huang, T.Hainzl, A.E.Sauer-Eriksson
compound source
Molecule: Carbonic Anhydrase
Chain: A, B
Ec: 4.2.1.1
Engineered: Yes
Organism_scientific: Coccomyxa Sp. Pa
Organism_taxid: 41892
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmal-C2
symmetry Space Group: P 43 21 2
R_factor 0.189 R_Free 0.250
crystal
cell
length a length b length c angle alpha angle beta angle gamma
76.835 76.835 222.139 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.51 Å
ligand SCN, ZN enzyme Lyase E.C.4.2.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural studies of beta-carbonic anhydrase from the green alga Coccomyxa: inhibitor complexes with anions and acetazolamide., Huang S, Hainzl T, Grundstrom C, Forsman C, Samuelsson G, Sauer-Eriksson AE, PLoS One. 2011;6(12):e28458. Epub 2011 Dec 5. PMID:22162771
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (78 Kb) [Save to disk]
  • Biological Unit Coordinates (3ucm.pdb1.gz) 145 Kb
  • LPC: Ligand-Protein Contacts for 3UCM
  • CSU: Contacts of Structural Units for 3UCM
  • Structure Factors (312 Kb)
  • Retrieve 3UCM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3UCM from S2C, [Save to disk]
  • Re-refined 3ucm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3UCM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3UCM
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3UCM, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ucm_A] [3ucm_B] [3ucm]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3UCM: [Pro_CA ] by SMART
  • Other resources with information on 3UCM
  • Community annotation for 3UCM at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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