3UCY Calcium-Binding Protein date Oct 27, 2011
title Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In T Presence Of Zn2+
authors F.T.Senguen, Z.Grabarek
compound source
Molecule: Calmodulin
Chain: A
Fragment: N-Terminal Domain Residues 2-80
Synonym: Cam
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Calm, Calm1, Calm2, Calm3, Calml2, Cam, Cam1, Cam2, C Camb, Camc, Camiii;
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Paed4
symmetry Space Group: P 43 21 2
R_factor 0.201 R_Free 0.228
crystal
cell
length a length b length c angle alpha angle beta angle gamma
35.298 35.298 142.937 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand CAC, MG, NA, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceX-ray Structures of Magnesium and Manganese Complexes with the N-Terminal Domain of Calmodulin: Insights into the Mechanism and Specificity of Metal Ion Binding to an EF-Hand., Senguen FT, Grabarek Z, Biochemistry. 2012 Jul 27. PMID:22803592
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (19 Kb) [Save to disk]
  • Biological Unit Coordinates (3ucy.pdb1.gz) 29 Kb
  • LPC: Ligand-Protein Contacts for 3UCY
  • CSU: Contacts of Structural Units for 3UCY
  • Structure Factors (468 Kb)
  • Retrieve 3UCY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3UCY from S2C, [Save to disk]
  • Re-refined 3ucy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3UCY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3UCY
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3UCY, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ucy] [3ucy_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3UCY: [EFh ] by SMART
  • Other resources with information on 3UCY
  • Community annotation for 3UCY at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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