3UE6 Signaling Protein date Oct 28, 2011
title The Dark Structure Of The Blue-Light Photoreceptor Aureochro
authors D.Mitra, X.Yang, K.Moffat
compound source
Molecule: Aureochrome1
Chain: A, B, C, D, E, F
Fragment: Unp Residues 176-337
Engineered: Yes
 Organism_scientific: Vaucheria Frigida
Organism_taxid: 195983
Gene: Aureo1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 43
R_factor 0.192 R_Free 0.256
crystal
cell
length a length b length c angle alpha angle beta angle gamma
73.987 73.987 177.468 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.75 Å
ligand FMN, PO4 enzyme
note 3UE6 (Molecule of the Month:pdb183)
Primary referenceCrystal structures of Aureochrome1 LOV suggest new design strategies for optogenetics., Mitra D, Yang X, Moffat K, Structure. 2012 Apr 4;20(4):698-706. doi: 10.1016/j.str.2012.02.016. Epub 2012, Apr 3. PMID:22483116
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (273 Kb) [Save to disk]
  • Biological Unit Coordinates (3ue6.pdb1.gz) 91 Kb
  • Biological Unit Coordinates (3ue6.pdb2.gz) 88 Kb
  • Biological Unit Coordinates (3ue6.pdb3.gz) 92 Kb
  • Biological Unit Coordinates (3ue6.pdb4.gz) 266 Kb
  • LPC: Ligand-Protein Contacts for 3UE6
  • CSU: Contacts of Structural Units for 3UE6
  • Structure Factors (305 Kb)
  • Retrieve 3UE6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3UE6 from S2C, [Save to disk]
  • Re-refined 3ue6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3UE6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3UE6
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3UE6, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ue6] [3ue6_E] [3ue6_A] [3ue6_F] [3ue6_B] [3ue6_C] [3ue6_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 3UE6: [PAC] [PAS ] by SMART
    • Other resources with information on 3UE6
  • Community annotation for 3UE6 at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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