3UGV Lyase date Nov 03, 2011
title Crystal Structure Of An Enolase From Alpha Pretobacterium Ba Target Efi-501650) With Bound Mg
authors M.W.Vetting, R.Toro, R.Bhosle, S.R.Wasserman, L.L.Morisco, B.Hill E.Washington, A.Scott Glenn, S.Chowdhury, B.Evans, J.Hammonds, W.D.Zencheck, H.J.Imker, J.A.Gerlt, S.C.Almo, Enzyme Function I (Efi)
compound source
Molecule: Enolase
Chain: A, B, C, D, E, F, G, H
Engineered: Yes
Organism_scientific: Alpha Proteobacterium Bal199
Organism_taxid: 331869
Gene: Bal199_22462
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet
symmetry Space Group: P 21 21 21
R_factor 0.161 R_Free 0.208
crystal
cell
length a length b length c angle alpha angle beta angle gamma
152.711 152.984 173.535 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand CL, MG, NI enzyme
Gene BAL199
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B, H, C, D, G


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (930 Kb) [Save to disk]
  • Biological Unit Coordinates (3ugv.pdb1.gz) 918 Kb
  • LPC: Ligand-Protein Contacts for 3UGV
  • CSU: Contacts of Structural Units for 3UGV
  • Structure Factors (9397 Kb)
  • Retrieve 3UGV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3UGV from S2C, [Save to disk]
  • Re-refined 3ugv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3UGV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3UGV
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3UGV, from MSDmotif at EBI
  • Fold representative 3ugv from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ugv_A] [3ugv_D] [3ugv_F] [3ugv_E] [3ugv] [3ugv_B] [3ugv_C] [3ugv_H] [3ugv_G]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3UGV: [MR_MLE ] by SMART
  • Other resources with information on 3UGV
  • Community annotation for 3UGV at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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