3UIG Apoptosis Apoptosis Inhibitor date Nov 04, 2011
title Crystal Structure Of Human Survivin In Complex With T3 Phosp H3(1-15) Peptide
authors J.Du, D.J.Patel
compound source
Molecule: Baculoviral Iap Repeat-Containing Protein 5
Chain: A, B
Fragment: Unp Residues 1-142
Synonym: Apoptosis Inhibitor 4, Apoptosis Inhibitor Survivi
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Birc5, Api4, Iap4
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)Ril
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-Sumo

Molecule: T3 Phosphorylated H3(1-15) Peptide
Chain: P, Q
Engineered: Yes

Synthetic: Yes
symmetry Space Group: C 1 2 1
R_factor 0.213 R_Free 0.250
crystal
cell
length a length b length c angle alpha angle beta angle gamma
115.778 71.042 82.287 90.00 128.81 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand TPO, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural Basis for Recognition of H3T3ph and Smac/DIABLO N-terminal Peptides by Human Survivin., Du J, Kelly AE, Funabiki H, Patel DJ, Structure. 2012 Jan 11;20(1):185-95. PMID:22244766
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (106 Kb) [Save to disk]
  • Biological Unit Coordinates (3uig.pdb1.gz) 99 Kb
  • LPC: Ligand-Protein Contacts for 3UIG
  • CSU: Contacts of Structural Units for 3UIG
  • Structure Factors (295 Kb)
  • Retrieve 3UIG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3UIG from S2C, [Save to disk]
  • Re-refined 3uig structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3UIG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3UIG
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3UIG, from MSDmotif at EBI
  • Fold representative 3uig from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3uig_Q] [3uig_P] [3uig_B] [3uig] [3uig_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3UIG: [BIR ] by SMART
  • Other resources with information on 3UIG
  • Community annotation for 3UIG at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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