3UKG	Dna Binding Protein Dna	date	Nov 09, 2011
title	Crystal Structure Of Rap1dna Complex
authors	B.Matot, Y.V.Le Bihan, S.Gasparini, M.H.Ledu
compound		source
Molecule: Dna-Binding Protein Rap1 Chain: A Fragment: Dna Binding Domain, Unp Residues 360-601 Synonym: Repressoractivator Site-Binding Protein, Sbf-E, T Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 559292 Strain: Atcc 204508 S288c Gene: Rap1, Grf1, Tuf1, Ynl216w, N1310 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Telomeric Dna Chain: C Engineered: Yes		Synthetic: Yes
Molecule: Telomeric Dna Chain: D Engineered: Yes		Synthetic: Yes
symmetry	Space Group: P 21 21 21	R_factor 0.191 R_Free 0.265
crystal cell	length a length b length c angle alpha angle beta angle gamma 40.595 102.944 116.755 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.95 Å
ligand	CA	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	The orientation of the C-terminal domain of the Saccharomyces cerevisiae Rap1 protein is determined by its binding to DNA., Matot B, Le Bihan YV, Lescasse R, Perez J, Miron S, David G, Castaing B, Weber P, Raynal B, Zinn-Justin S, Gasparini S, Le Du MH, Nucleic Acids Res. 2011 Dec 1. PMID:22139930

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (137 Kb) [Save to disk] Biological Unit Coordinates (3ukg.pdb1.gz) 131 Kb LPC: Ligand-Protein Contacts for 3UKG CSU: Contacts of Structural Units for 3UKG Structure Factors (65 Kb) Retrieve 3UKG in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3UKG from S2C, [Save to disk] Re-refined 3ukg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3UKG in 3D

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Visual 3D analysis of 3UKG

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3UKG, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3ukg_D] [3ukg_C] [3ukg_A] [3ukg] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3UKG: [SANT ] by SMART

Other resources with information on 3UKG

Community annotation for 3UKG at PDBWiki (http://pdbwiki.org)

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