3UNE Hydrolase date Nov 15, 2011
title Mouse Constitutive 20s Proteasome
authors E.Huber, M.Basler, R.Schwab, W.Heinemeyer, C.Kirk, M.Groettrup, M.
compound source
Molecule: Proteasome Subunit Alpha Type-2
Chain: A, O, c, q
Synonym: Macropain Subunit C3, Multicatalytic Endopeptidase Subunit C3, Proteasome Component C3;
Ec: 3.4.25.1
 Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090

Molecule: Proteasome Subunit Alpha Type-4
Chain: B, P, d, r
Synonym: Macropain Subunit C9, Multicatalytic Endopeptidase Subunit C9, Proteasome Component C9, Proteasome Subunit L;
Ec: 3.4.25.1
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090

Molecule: Proteasome Subunit Alpha Type-7
Chain: C, Q, e, s
Synonym: Proteasome Subunit Rc6-1
Ec: 3.4.25.1
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090

Molecule: Proteasome Subunit Alpha Type-5
Chain: D, R, f, t
Synonym: Macropain Zeta Chain, Multicatalytic Endopeptidase Zeta Chain, Proteasome Zeta Chain;
Ec: 3.4.25.1
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090

Molecule: Proteasome Subunit Alpha Type-1
Chain: E, S, g, u
Synonym: Macropain Subunit C2, Multicatalytic Endopeptidase Subunit C2, Proteasome Component C2, Proteasome Nu Chain;
Ec: 3.4.25.1
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090

Molecule: Proteasome Subunit Alpha Type-3
Chain: F, T, h, v
Synonym: Macropain Subunit C8, Multicatalytic Endopeptidase Subunit C8, Proteasome Component C8, Proteasome Subunit K;
Ec: 3.4.25.1
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090

Molecule: Proteasome Subunit Alpha Type-6
Chain: G, U, I, w
Synonym: Macropain Iota Chain, Multicatalytic Endopeptidase Iota Chain, Proteasome Iota Chain;
Ec: 3.4.25.1
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090

Molecule: Proteasome Subunit Beta Type-7
Chain: H, V, j, x
Synonym: Macropain Chain Z, Multicatalytic Endopeptidase Co Chain Z, Proteasome Subunit Z;
Ec: 3.4.25.1
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090

Molecule: Proteasome Subunit Beta Type-3
Chain: I, W, k, y
Synonym: Proteasome Chain 13, Proteasome Component C10-II, Theta Chain;
Ec: 3.4.25.1
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090

Molecule: Proteasome Subunit Beta Type-2
Chain: J, X, l, z
Synonym: Macropain Subunit C7-I, Multicatalytic Endopeptida Subunit C7-I, Proteasome Component C7-I;
Ec: 3.4.25.1
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090

Molecule: Proteasome Subunit Beta Type-5
Chain: K, Y, m, 1
Synonym: Macropain Epsilon Chain, Multicatalytic Endopeptid Complex Epsilon Chain, Proteasome Chain 6, Proteasome Epsil Proteasome Subunit X;
Ec: 3.4.25.1
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090

Molecule: Proteasome Subunit Beta Type-1
Chain: L, Z, n, 2
Synonym: Macropain Subunit C5, Multicatalytic Endopeptidase Subunit C5, Proteasome Component C5, Proteasome Gamma Chain
Ec: 3.4.25.1
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090

Molecule: Proteasome Subunit Beta Type-4
Chain: M, a, o, 3
Synonym: Proteasome Beta Chain, Low Molecular Mass Protein Macropain Beta Chain, Multicatalytic Endopeptidase Complex Chain, Proteasome Chain 3;
Ec: 3.4.25.1
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090

Molecule: Proteasome Subunit Beta Type-6
Chain: N, b, p, 4
Synonym: Low Molecular Mass Protein 19, Macropain Delta Cha Multicatalytic Endopeptidase Complex Delta Chain, Proteasom Chain, Proteasome Subunit Y;
Ec: 3.4.25.1
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
symmetry Space Group: P 1 21 1
R_factor 0.220 R_Free 0.246
crystal
cell
length a length b length c angle alpha angle beta angle gamma
170.970 201.300 226.010 90.00 108.07 90.00
method X-Ray Diffractionresolution 3.20 Å
ligand
enzyme Hydrolase E.C.3.4.25.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
2, Z, L, n


G, U, w, i


J, z, X, l


K, Y, 1, m


N, j, H, b, x, V, p, 4


S, E, u, g


T, v, F, h


a, M, 3, o


c, q, A, O


d, B, r, P


e, s, Q, C


t, D, f, R


y, k, W, I


Primary referenceImmuno- and constitutive proteasome crystal structures reveal differences in substrate and inhibitor specificity., Huber EM, Basler M, Schwab R, Heinemeyer W, Kirk CJ, Groettrup M, Groll M, Cell. 2012 Feb 17;148(4):727-38. PMID:22341445
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (4061 Kb) [Save to disk]
  • Biological Unit Coordinates (3une.pdb1.gz) 2025 Kb
  • Biological Unit Coordinates (3une.pdb2.gz) 2042 Kb
  • CSU: Contacts of Structural Units for 3UNE
  • Structure Factors (1932 Kb)
  • Retrieve 3UNE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3UNE from S2C, [Save to disk]
  • Re-refined 3une structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3UNE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3UNE
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3UNE, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3une_C] [3une_W] [3une_F] [3une_D] [3une_z] [3une_a] [3une_R] [3une_J] [3une_h] [3une] [3une_G] [3une_B] [3une_S] [3une_i] [3une_T] [3une_l] [3une_4] [3une_K] [3une_d] [3une_u] [3une_U] [3une_Q] [3une_q] [3une_N] [3une_b] [3une_v] [3une_j] [3une_r] [3une_V] [3une_3] [3une_P] [3une_O] [3une_k] [3une_y] [3une_H] [3une_Y] [3une_2] [3une_s] [3une_X] [3une_w] [3une_m] [3une_M] [3une_1] [3une_n] [3une_L] [3une_p] [3une_t] [3une_Z] [3une_A] [3une_x] [3une_I] [3une_f] [3une_c] [3une_g] [3une_E] [3une_e] [3une_o]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3UNE: [Proteasome_A_N ] by SMART
    • Other resources with information on 3UNE
  • Community annotation for 3UNE at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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