3UOI Oxidoreductase date Nov 16, 2011
title Mycobacterium Tuberculosis Bacterioferritin, Bfra
authors L.M.Mcmath, C.W.Goulding, Tb Structural Genomics Consortium (T
compound source
Molecule: Bacterioferritin
Chain: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R V, W, X, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, U, V, W, X;
Synonym: Bfr
Ec: 1.16.3.1
Engineered: Yes
Organism_scientific: Mycobacterium Tuberculosis
Organism_taxid: 1773
Strain: H37rv
Gene: Bfr, Bfra, Mt1925, Mtcy180.42c, Rv1876
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(Gold)De3
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28b+
symmetry Space Group: P 1
R_factor 0.148 R_Free 0.194
crystal
cell
length a length b length c angle alpha angle beta angle gamma
122.962 123.225 175.452 89.95 89.95 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand HEM enzyme Oxidoreductase E.C.1.16.3.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
S, T, N, K, E, J, W, B, H, D, I, G, U, F, V, Q, M, C, L, A, O, X, P, R


a, d, j, u, k, g, t, e, v, s, c, q, b, w, r, x, h, f, i, n, m, l, p, o


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1358 Kb) [Save to disk]
  • Biological Unit Coordinates (3uoi.pdb1.gz) 682 Kb
  • Biological Unit Coordinates (3uoi.pdb2.gz) 667 Kb
  • LPC: Ligand-Protein Contacts for 3UOI
  • CSU: Contacts of Structural Units for 3UOI
  • Structure Factors (5323 Kb)
  • Retrieve 3UOI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3UOI from S2C, [Save to disk]
  • Re-refined 3uoi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3UOI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3UOI
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3UOI, from MSDmotif at EBI
  • Fold representative 3uoi from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3uoi_x] [3uoi_b] [3uoi_W] [3uoi_e] [3uoi_O] [3uoi_M] [3uoi_w] [3uoi_h] [3uoi_o] [3uoi_S] [3uoi_G] [3uoi_B] [3uoi_I] [3uoi_p] [3uoi_V] [3uoi_X] [3uoi_l] [3uoi_k] [3uoi_t] [3uoi_m] [3uoi_A] [3uoi_c] [3uoi_T] [3uoi_r] [3uoi_U] [3uoi_L] [3uoi_n] [3uoi_i] [3uoi_a] [3uoi_H] [3uoi_g] [3uoi_N] [3uoi_f] [3uoi] [3uoi_R] [3uoi_J] [3uoi_s] [3uoi_K] [3uoi_u] [3uoi_Q] [3uoi_j] [3uoi_E] [3uoi_P] [3uoi_C] [3uoi_D] [3uoi_v] [3uoi_F] [3uoi_d] [3uoi_q]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3UOI
  • Community annotation for 3UOI at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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