3UOI Oxidoreductase date Nov 16, 2011
title Mycobacterium Tuberculosis Bacterioferritin, Bfra
authors L.M.Mcmath, C.W.Goulding, Tb Structural Genomics Consortium (T
compound source
Molecule: Bacterioferritin
Chain: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R V, W, X, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, U, V, W, X;
Synonym: Bfr
Engineered: Yes
Organism_scientific: Mycobacterium Tuberculosis
Organism_taxid: 1773
Strain: H37rv
Gene: Bfr, Bfra, Mt1925, Mtcy180.42c, Rv1876
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(Gold)De3
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28b+
symmetry Space Group: P 1
R_factor 0.148 R_Free 0.194
length a length b length c angle alpha angle beta angle gamma
122.962 123.225 175.452 89.95 89.95 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand HEM enzyme Oxidoreductase E.C. BRENDA
S, T, N, K, E, J, W, B, H, D, I, G, U, F, V, Q, M, C, L, A, O, X, P, R

a, d, j, u, k, g, t, e, v, s, c, q, b, w, r, x, h, f, i, n, m, l, p, o

Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1358 Kb) [Save to disk]
  • Biological Unit Coordinates (3uoi.pdb1.gz) 682 Kb
  • Biological Unit Coordinates (3uoi.pdb2.gz) 667 Kb
  • LPC: Ligand-Protein Contacts for 3UOI
  • CSU: Contacts of Structural Units for 3UOI
  • Structure Factors (5323 Kb)
  • Retrieve 3UOI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3UOI from S2C, [Save to disk]
  • Re-refined 3uoi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3UOI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3UOI
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3UOI, from MSDmotif at EBI
  • Fold representative 3uoi from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3uoi_x] [3uoi_b] [3uoi_W] [3uoi_e] [3uoi_O] [3uoi_M] [3uoi_w] [3uoi_h] [3uoi_o] [3uoi_S] [3uoi_G] [3uoi_B] [3uoi_I] [3uoi_p] [3uoi_V] [3uoi_X] [3uoi_l] [3uoi_k] [3uoi_t] [3uoi_m] [3uoi_A] [3uoi_c] [3uoi_T] [3uoi_r] [3uoi_U] [3uoi_L] [3uoi_n] [3uoi_i] [3uoi_a] [3uoi_H] [3uoi_g] [3uoi_N] [3uoi_f] [3uoi] [3uoi_R] [3uoi_J] [3uoi_s] [3uoi_K] [3uoi_u] [3uoi_Q] [3uoi_j] [3uoi_E] [3uoi_P] [3uoi_C] [3uoi_D] [3uoi_v] [3uoi_F] [3uoi_d] [3uoi_q]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3UOI
  • Community annotation for 3UOI at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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