3URZ Protein Binding date Nov 22, 2011
title Crystal Structure Of A Putative Protein Binding Protein (Bac From Bacteroides Ovatus Atcc 8483 At 2.19 A Resolution
authors Joint Center For Structural Genomics (Jcsg)
compound source
Molecule: Uncharacterized Protein
Chain: A, B
Fragment: Unp Residues 21-227
Engineered: Yes
Organism_scientific: Bacteroides Ovatus
Organism_taxid: 411476
Atcc: 8483
Gene: Bacova_03105
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Hk100
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Speedet
symmetry Space Group: P 1 21 1
R_factor 0.217 R_Free 0.240
crystal
cell
length a length b length c angle alpha angle beta angle gamma
30.703 41.597 236.878 90.00 92.52 90.00
method X-Ray Diffractionresolution 2.19 Å
ligand CSX, EDO, MSE, PG4, ZN enzyme
Gene BACOVA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (151 Kb) [Save to disk]
  • Biological Unit Coordinates (3urz.pdb1.gz) 72 Kb
  • Biological Unit Coordinates (3urz.pdb2.gz) 75 Kb
  • LPC: Ligand-Protein Contacts for 3URZ
  • CSU: Contacts of Structural Units for 3URZ
  • Structure Factors (3623 Kb)
  • Retrieve 3URZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3URZ from S2C, [Save to disk]
  • Re-refined 3urz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3URZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3URZ
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3URZ, from MSDmotif at EBI
  • Fold representative 3urz from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3urz_B] [3urz_A] [3urz]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3URZ
  • Community annotation for 3URZ at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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