3UT1 Transcription date Nov 24, 2011
title Crystal Structure Of The 3-Mbt Repeat Domain Of L3mbtl3
authors N.Zhong, W.Tempel, A.K.Wernimont, S.Graslund, C.H.Arrowsmith, A.M C.Bountra, J.Weigelt, P.J.Brown, Structural Genomics Consortiu
compound source
Molecule: Lethal(3)Malignant Brain Tumor-Like Protein 3
Chain: A
Fragment: Unp Residues 228-551
Synonym: H-L(3)Mbt-Like Protein 3, L(3)Mbt-Like Protein 3,
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: L3mbtl3, Kiaa1798, Mbt1
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Pet28-Sbp-Tev
Expression_system_plasmid: Bl21-V2r-Prare2
symmetry Space Group: C 1 2 1
R_factor 0.222 R_Free 0.267
crystal
cell
length a length b length c angle alpha angle beta angle gamma
92.287 70.619 58.574 90.00 119.95 90.00
method X-Ray Diffractionresolution 2.05 Å
ligand CO, EPE, UNX enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk]
  • Biological Unit Coordinates (3ut1.pdb1.gz) 104 Kb
  • LPC: Ligand-Protein Contacts for 3UT1
  • CSU: Contacts of Structural Units for 3UT1
  • Structure Factors (308 Kb)
  • Retrieve 3UT1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3UT1 from S2C, [Save to disk]
  • Re-refined 3ut1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3UT1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3UT1
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3UT1, from MSDmotif at EBI
  • Fold representative 3ut1 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ut1_A] [3ut1]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3UT1: [MBT ] by SMART
  • Other resources with information on 3UT1
  • Community annotation for 3UT1 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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