3UV2	Transcription	date	Nov 29, 2011
title	Crystal Structure Of The Bromodomain Of Human Nucleosome-Rem Factor Subunit Bptf
authors	P.Filippakopoulos, S.Picaud, T.Keates, E.Ugochukwu, F.Von Delft, C.H.Arrowsmith, A.M.Edwards, J.Weigelt, C.Bountra, S.Knapp, Stru Genomics Consortium (Sgc)
compound		source
Molecule: Bromodomain Of Human Nucleosome-Remodeling Factor Bptf; Chain: A Fragment: Unp Residues 2914-3037 Synonym: Bromodomain And Phd Finger-Containing Transcriptio Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Bptf, Fac1, Falz Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3)-R3 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pnic28-Bsa4
symmetry	Space Group: P 1 21 1	R_factor 0.162 R_Free 0.209
crystal cell	length a length b length c angle alpha angle beta angle gamma 27.141 66.809 39.259 90.00 106.16 90.00
method	X-Ray Diffraction	resolution	1.58 Å
ligand	7PE	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Histone recognition and large-scale structural analysis of the human bromodomain family., Filippakopoulos P, Picaud S, Mangos M, Keates T, Lambert JP, Barsyte-Lovejoy D, Felletar I, Volkmer R, Muller S, Pawson T, Gingras AC, Arrowsmith CH, Knapp S, Cell. 2012 Mar 30;149(1):214-31. PMID:22464331

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk] Biological Unit Coordinates (3uv2.pdb1.gz) 44 Kb LPC: Ligand-Protein Contacts for 3UV2 CSU: Contacts of Structural Units for 3UV2 Structure Factors (241 Kb) Retrieve 3UV2 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3UV2 from S2C, [Save to disk] Re-refined 3uv2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3UV2 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3UV2

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3UV2, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3uv2] [3uv2_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3UV2: [BROMO ] by SMART

Other resources with information on 3UV2

Community annotation for 3UV2 at PDBWiki (http://pdbwiki.org)

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