3UVU Protein Binding Peptide date Nov 30, 2011
title Structural Basis Of Nuclear Import Of Flap Endonuclease 1 (F
authors A.C.Barros, A.A.S.Takeda, M.R.M.Fontes
compound source
Molecule: Flap Endonuclease 1 (Fen1) Peptide
Chain: B
Synonym: Fen-1, Dnase Iv, Flap Structure-Specific Endonucle Maturation Factor 1, Mf1, Hfen-1;
Engineered: Yes
Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606

Molecule: Importin Subunit Alpha-2
Chain: A
Engineered: Yes

Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
Gene: Kpna2, Rch1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.168 R_Free 0.215
crystal
cell
length a length b length c angle alpha angle beta angle gamma
78.870 89.561 100.343 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.38 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis of nuclear import of flap endonuclease 1 (FEN1)., de Barros AC, Takeda AA, Chang CW, Kobe B, Fontes MR, Acta Crystallogr D Biol Crystallogr. 2012 Jul;68(Pt 7):743-50. doi:, 10.1107/S0907444912010281. Epub 2012 Jun 15. PMID:22751659
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (74 Kb) [Save to disk]
  • Biological Unit Coordinates (3uvu.pdb1.gz) 69 Kb
  • CSU: Contacts of Structural Units for 3UVU
  • Structure Factors (423 Kb)
  • Retrieve 3UVU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3UVU from S2C, [Save to disk]
  • Re-refined 3uvu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3UVU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3UVU
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3UVU, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3uvu] [3uvu_A] [3uvu_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 3UVU: [ARM] [RNAse_Pc ] by SMART
  • Other resources with information on 3UVU
  • Community annotation for 3UVU at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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