3V1W Calcium Binding Protein date Dec 10, 2011
title Molecular Basis For Multiple Ligand Binding Of Calsequestrin Potential Inhibition By Caffeine And Gallocatecin
authors A.K.Subramanian, M.N.Nissen, K.M.Lewis, E.J.Sanchez, A.K.Muralid C.Kang
compound source
Molecule: Calsequestrin-1
Chain: A
Synonym: Aspartactin, Calsequestrin, Skeletal Muscle Isofor Laminin-Binding Protein
 Organism_scientific: Oryctolagus Cuniculus
Organism_common: European Rabbit,Japanese White Rabbit,Dome Rabbit,Rabbits;
Organism_taxid: 9986
symmetry Space Group: C 2 2 21
R_factor 0.171 R_Free 0.222
crystal
cell
length a length b length c angle alpha angle beta angle gamma
59.082 144.592 110.965 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.91 Å
ligand CA, MPD, MRD, NA, NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (75 Kb) [Save to disk]
  • Biological Unit Coordinates (3v1w.pdb1.gz) 69 Kb
  • Biological Unit Coordinates (3v1w.pdb2.gz) 136 Kb
  • LPC: Ligand-Protein Contacts for 3V1W
  • CSU: Contacts of Structural Units for 3V1W
  • Structure Factors (385 Kb)
  • Retrieve 3V1W in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3V1W from S2C, [Save to disk]
  • Re-refined 3v1w structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3V1W in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3V1W
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3V1W, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3v1w_A] [3v1w]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 3V1W
  • Community annotation for 3V1W at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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