3V2R Protein Binding date Dec 12, 2011
title Compcc In Complex With Fatty Acids
authors J.Stetefeld
compound source
Molecule: Cartilage Oligomerization Matrix Protein (Coiled- Domain);
Chain: A, B, C, D, E
Engineered: Yes
Other_details: Compcc
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
symmetry Space Group: P 1 21 1
R_factor 0.201 R_Free 0.275
crystal
cell
length a length b length c angle alpha angle beta angle gamma
37.862 49.111 54.258 90.00 104.15 90.00
method X-Ray Diffractionresolution 2.75 Å
ligand OLA enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (41 Kb) [Save to disk]
  • Biological Unit Coordinates (3v2r.pdb1.gz) 37 Kb
  • LPC: Ligand-Protein Contacts for 3V2R
  • CSU: Contacts of Structural Units for 3V2R
  • Structure Factors (37 Kb)
  • Retrieve 3V2R in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3V2R from S2C, [Save to disk]
  • Re-refined 3v2r structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3V2R in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3V2R
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3V2R, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3v2r_D] [3v2r_A] [3v2r_C] [3v2r] [3v2r_B] [3v2r_E]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3V2R
  • Community annotation for 3V2R at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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