3V3Q	Transcription Antagonist	date	Dec 14, 2011
title	Crystal Structure Of Human Nur77 Ligand-Binding Domain In Co Ethyl 2-[2,3,4 Trimethoxy-6(1-Octanoyl)Phenyl]Acetate
authors	Q.Zhang, C.Shi, K.Yang, Y.Chen, Y.Zhan, Q.Wu, T.Lin
compound		source
Molecule: Nuclear Receptor Subfamily 4 Group A Member 1 Chain: A, B Fragment: Ligand-Bingding Domain, Unp Residues 351-598 Synonym: Early Response Protein Nak1, Nuclear Hormone Recep Nur77, Nur77, Orphan Nuclear Receptor Hmr, Orphan Nuclear Tr3, St-59, Testicular Receptor 3; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Nr4a1, Gfrp1, Hmr, Nak1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet22b
symmetry	Space Group: P 21 21 21	R_factor 0.209 R_Free 0.286
crystal cell	length a length b length c angle alpha angle beta angle gamma 74.242 76.773 129.193 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.22 Å
ligand	GOL, NA, TMY	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	The orphan nuclear receptor Nur77 regulates LKB1 localization and activates AMPK., Zhan YY, Chen Y, Zhang Q, Zhuang JJ, Tian M, Chen HZ, Zhang LR, Zhang HK, He JP, Wang WJ, Wu R, Wang Y, Shi C, Yang K, Li AZ, Xin YZ, Li TY, Yang JY, Zheng ZH, Yu CD, Lin SC, Chang C, Huang PQ, Lin T, Wu Q, Nat Chem Biol. 2012 Nov;8(11):897-904. doi: 10.1038/nchembio.1069. Epub 2012 Sep , 16. PMID:22983157

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (90 Kb) [Save to disk] Biological Unit Coordinates (3v3q.pdb1.gz) 84 Kb LPC: Ligand-Protein Contacts for 3V3Q CSU: Contacts of Structural Units for 3V3Q Structure Factors (438 Kb) Retrieve 3V3Q in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3V3Q from S2C, [Save to disk] Re-refined 3v3q structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Visual 3D analysis of 3V3Q

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3V3Q, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3v3q] [3v3q_A] [3v3q_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3V3Q: [HOLI ] by SMART

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