3V4D date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MSE enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B, D, E, C, F


Primary referenceStructure of Escherichia coli RutC, a member of the YjgF family and putative aminoacrylate peracid reductase of the rut operon., Knapik AA, Petkowski JJ, Otwinowski Z, Cymborowski MT, Cooper DR, Chruszcz M, Krajewska WM, Minor W, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Nov 1;68(Pt 11):1294-9., doi: 10.1107/S1744309112041796. Epub 2012 Oct 26. PMID:23143235
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (243 Kb) [Save to disk]
  • Biological Unit Coordinates (3v4d.pdb1.gz) 119 Kb
  • Biological Unit Coordinates (3v4d.pdb2.gz) 120 Kb
  • LPC: Ligand-Protein Contacts for 3V4D
  • CSU: Contacts of Structural Units for 3V4D
  • Structure Factors (1383 Kb)
  • Retrieve 3V4D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3V4D from S2C, [Save to disk]
  • Re-refined 3v4d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3V4D in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3v4d] [3v4d_A] [3v4d_B] [3v4d_C] [3v4d_D] [3v4d_E] [3v4d_F]
  • SWISS-PROT database:

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