OCA Atlas for 3V4Y

3V4Y

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

15P, GOL, MN

enzyme

Gene
Ontology

Chain	Function	Process	Component
E, C, G, A	protein binding cadherin binding involved in...

Primary reference

The Molecular Basis for Substrate Specificity of the Nuclear NIPP1:PP1 Holoenzyme., O'Connell N, Nichols SR, Heroes E, Beullens M, Bollen M, Peti W, Page R, Structure. 2012 Oct 10;20(10):1746-56. doi: 10.1016/j.str.2012.08.003. Epub 2012 , Aug 30. PMID:22940584

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (664 Kb) [Save to disk]

Biological Unit Coordinates (3v4y.pdb1.gz) 167 Kb

Biological Unit Coordinates (3v4y.pdb2.gz) 166 Kb

Biological Unit Coordinates (3v4y.pdb3.gz) 167 Kb

Biological Unit Coordinates (3v4y.pdb4.gz) 168 Kb

LPC: Ligand-Protein Contacts for 3V4Y

CSU: Contacts of Structural Units for 3V4Y

Structure Factors (460 Kb)

Retrieve 3V4Y in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3V4Y from S2C, [Save to disk]

Re-refined 3v4y structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3V4Y in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3v4y_A] [3v4y] [3v4y_B] [3v4y_C] [3v4y_D] [3v4y_E] [3v4y_F] [3v4y_G] [3v4y_H]

SWISS-PROT database:

Domain found in 3V4Y: [PP2Ac ] by SMART

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