3V53	Rna Binding Protein	date	Dec 16, 2011
title	Crystal Structure Of Human Rbm25
authors	D.S.Gong
compound		source
Molecule: Rna-Binding Protein 25 Chain: A, B, C, D, E Fragment: Unp Residues 734-843 Synonym: Arggluasp-Rich Protein Of 120 Kda, Red120, Prote Rna-Binding Motif Protein 25, Rna-Binding Region-Containing 7; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Rbm25 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: P28
symmetry	Space Group: C 2 2 21	R_factor 0.264 R_Free 0.298
crystal cell	length a length b length c angle alpha angle beta angle gamma 81.577 86.172 197.174 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.90 Å
Gene Ontology	Chain Function Process Component A, D, C, E, B
Primary reference	Crystal structure and functional characterization of the human RBM25 PWI domain and its flanking basic region., Gong D, Yang F, Li F, Qian D, Wu M, Shao Z, Wu M, Wu J, Shi Y, Biochem J. 2012 Nov 28. PMID:23190262

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (179 Kb) [Save to disk] Biological Unit Coordinates (3v53.pdb1.gz) 36 Kb Biological Unit Coordinates (3v53.pdb2.gz) 37 Kb Biological Unit Coordinates (3v53.pdb3.gz) 36 Kb Biological Unit Coordinates (3v53.pdb4.gz) 37 Kb Biological Unit Coordinates (3v53.pdb5.gz) 32 Kb CSU: Contacts of Structural Units for 3V53 Structure Factors (242 Kb) Retrieve 3V53 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3V53 from S2C, [Save to disk] Re-refined 3v53 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3V53 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3V53

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3V53, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3v53_A] [3v53_E] [3v53_B] [3v53_C] [3v53] [3v53_D] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3V53: [PWI ] by SMART

Other resources with information on 3V53

Community annotation for 3V53 at PDBWiki (http://pdbwiki.org)

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