3V5P	Transferase Transferase Inhibitor	date	Dec 16, 2011
title	Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (T Complex With Inhibitor Uw1288
authors	E.A.Merritt, E.T.Larson
compound		source
Molecule: Calmodulin-Domain Protein Kinase 1 Chain: A Fragment: Unp Residues 30-507 Synonym: Calmodulin-Domain Protein Kinase, Putative Ec: 2.7.11.17 Engineered: Yes		Organism_scientific: Toxoplasma Gondii Organism_taxid: 5811 Gene: Aag53993, Cdpk1, Tggt1_059880, Tgveg_042030 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Ava0421
symmetry	Space Group: P 1 21 1	R_factor 0.208 R_Free 0.259
crystal cell	length a length b length c angle alpha angle beta angle gamma 48.160 73.510 66.770 90.00 100.28 90.00
method	X-Ray Diffraction	resolution	2.10 Å
ligand	C88	enzyme	Transferase E.C.2.7.11.17 BRENDA
Gene	TGGT1 ; TGVEG
Gene Ontology	Chain Function Process Component A
Primary reference	Multiple determinants for selective inhibition of apicomplexan calcium-dependent protein kinase CDPK1., Larson ET, Ojo KK, Murphy RC, Johnson SM, Zhang Z, Kim JE, Leibly DJ, Fox AM, Reid MC, Dale EJ, Perera BG, Kim J, Hewitt SN, Hol WG, Verlinde CL, Fan E, Van Voorhis WC, Maly DJ, Merritt EA, J Med Chem. 2012 Feb 27. PMID:22369268

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (157 Kb) [Save to disk] Biological Unit Coordinates (3v5p.pdb1.gz) 152 Kb LPC: Ligand-Protein Contacts for 3V5P CSU: Contacts of Structural Units for 3V5P Structure Factors (627 Kb) Retrieve 3V5P in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3V5P from S2C, [Save to disk] Re-refined 3v5p structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3V5P in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3V5P

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3V5P, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3v5p_A] [3v5p] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 3V5P: [EFh] [S_TKc ] by SMART

Other resources with information on 3V5P

Community annotation for 3V5P at PDBWiki (http://pdbwiki.org)

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