3V7X Lyase Lyase Inhibitor date Dec 22, 2011
title Complex Of Human Carbonic Anhydrase II With N-[2-(3,4- Dimethoxyphenyl)Ethyl]-4-Sulfamoylbenzamide
authors P.Mader, J.Brynda, P.Rezacova
compound source
Molecule: Carbonic Anhydrase 2
Chain: A
Synonym: Carbonate Dehydratase II, Carbonic Anhydrase C, Ca Carbonic Anhydrase II, Ca-II;
Ec: 4.2.1.1
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 1 21 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.140 41.510 71.840 90.00 104.23 90.00
method X-Ray Diffractionresolution 1.03 Å
ligand D7A, GOL, MBO, ZN enzyme Lyase E.C.4.2.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSynthesis, Structure-Activity Relationship Studies, and X-ray Crystallographic Analysis of Arylsulfonamides as Potent Carbonic Anhydrase Inhibitors., Gitto R, Damiano FM, Mader P, De Luca L, Ferro S, Supuran CT, Vullo D, Brynda J, Rezacova P, Chimirri A, J Med Chem. 2012 Apr 6. PMID:22443141
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (111 Kb) [Save to disk]
  • Biological Unit Coordinates (3v7x.pdb1.gz) 106 Kb
  • LPC: Ligand-Protein Contacts for 3V7X
  • CSU: Contacts of Structural Units for 3V7X
  • Structure Factors (993 Kb)
  • Retrieve 3V7X in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3V7X from S2C, [Save to disk]
  • Re-refined 3v7x structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3V7X in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3V7X
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3V7X, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3v7x_A] [3v7x]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3V7X: [Carb_anhydrase ] by SMART
    • Other resources with information on 3V7X
  • Community annotation for 3V7X at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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