3VEF	Oxidoreductase	date	Jan 07, 2012
title	Rhodococcus Jostii Rha1 Dypb N246h Variant In Complex With H
authors	J.C.Grigg, R.Singh, Z.Armstrong, L.D.Eltis, M.E.P.Murphy
compound		source
Molecule: Dypb Chain: A, B, C Ec: 1.11.1.- Engineered: Yes Mutation: Yes		Organism_scientific: Rhodococcus Jostii Organism_taxid: 101510 Strain: Rha1 Gene: Dypb, Rha1_ro02407 Expression_system: Escherichia Coli Expression_system_taxid: 511693 Expression_system_strain: Bl21 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28a
symmetry	Space Group: P 32 2 1	R_factor 0.156 R_Free 0.206
crystal cell	length a length b length c angle alpha angle beta angle gamma 132.306 132.306 158.790 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.64 Å
ligand	CL, HEM	enzyme	Oxidoreductase E.C.1.11.1 BRENDA
Gene	RHA1
Gene Ontology	Chain Function Process Component A, C, B peroxidase activity
Primary reference	Distal heme pocket residues of B-type dye-decolorizing peroxidase: arginine but not aspartate is essential for peroxidase activity., Singh R, Grigg JC, Armstrong Z, Murphy ME, Eltis LD, J Biol Chem. 2012 Mar 23;287(13):10623-30. Epub 2012 Feb 3. PMID:22308037

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (158 Kb) [Save to disk] Biological Unit Coordinates (3vef.pdb1.gz) 298 Kb LPC: Ligand-Protein Contacts for 3VEF CSU: Contacts of Structural Units for 3VEF Structure Factors (666 Kb) Retrieve 3VEF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3VEF from S2C, [Save to disk] Re-refined 3vef structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3VEF, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3vef] [3vef_C] [3vef_A] [3vef_B] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3VEF

Community annotation for 3VEF at PDBWiki (http://pdbwiki.org)

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