3VFK date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 3FG, 3MY, CCS, DAL, GCS, GHP, MAN, NAG, OMX, T55 enzyme
Primary referenceStructure of the complex between teicoplanin and a bacterial cell-wall peptide: use of a carrier-protein approach., Economou NJ, Zentner IJ, Lazo E, Jakoncic J, Stojanoff V, Weeks SD, Grasty KC, Cocklin S, Loll PJ, Acta Crystallogr D Biol Crystallogr. 2013 Apr;69(Pt 4):520-33. doi:, 10.1107/S0907444912050469. Epub 2013 Mar 14. PMID:23519660
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (22 Kb) [Save to disk]
  • Biological Unit Coordinates (3vfk.pdb1.gz) 16 Kb
  • LPC: Ligand-Protein Contacts for 3VFK
  • CSU: Contacts of Structural Units for 3VFK
  • Structure Factors (15 Kb)
  • Retrieve 3VFK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3VFK from S2C, [Save to disk]
  • Re-refined 3vfk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3VFK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3vfk] [3vfk_A] [3vfk_G]
  • SWISS-PROT database:
  • Domain found in 3VFK: [UBQ ] by SMART

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