OCA Atlas for 3VH8

3VH8

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

NAG

enzyme

Gene
Ontology

Chain	Function	Process	Component
B, E		cellular response to iron io...

Primary reference

Killer cell immunoglobulin-like receptor 3DL1-mediated recognition of human leukocyte antigen B., Vivian JP, Duncan RC, Berry R, O'Connor GM, Reid HH, Beddoe T, Gras S, Saunders PM, Olshina MA, Widjaja JM, Harpur CM, Lin J, Maloveste SM, Price DA, Lafont BA, McVicar DW, Clements CS, Brooks AG, Rossjohn J, Nature. 2011 Oct 23;479(7373):401-5. doi: 10.1038/nature10517. PMID:22020283

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (249 Kb) [Save to disk]

Biological Unit Coordinates (3vh8.pdb1.gz) 124 Kb

Biological Unit Coordinates (3vh8.pdb2.gz) 122 Kb

LPC: Ligand-Protein Contacts for 3VH8

CSU: Contacts of Structural Units for 3VH8

Structure Factors (2070 Kb)

Retrieve 3VH8 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3VH8 from S2C, [Save to disk]

Re-refined 3vh8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3VH8 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3vh8] [3vh8_A] [3vh8_B] [3vh8_C] [3vh8_D] [3vh8_E] [3vh8_F] [3vh8_G] [3vh8_H]

SWISS-PROT database:

Domains found in 3VH8: [IG] [IGc1 ] by SMART

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