3VRT		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	YS2	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Butyl pocket formation in the vitamin d receptor strongly affects the agonistic or antagonistic behavior of ligands., Yoshimoto N, Sakamaki Y, Haeta M, Kato A, Inaba Y, Itoh T, Nakabayashi M, Ito N, Yamamoto K, J Med Chem. 2012 May 10;55(9):4373-81. Epub 2012 Apr 27. PMID:22512505

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (46 Kb) [Save to disk] Biological Unit Coordinates (3vrt.pdb1.gz) 41 Kb LPC: Ligand-Protein Contacts for 3VRT CSU: Contacts of Structural Units for 3VRT Structure Factors (158 Kb) Retrieve 3VRT in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3VRT from S2C, [Save to disk] Re-refined 3vrt structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3VRT in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3vrt] [3vrt_A] [3vrt_C] SWISS-PROT database: Domain found in 3VRT: [HOLI ] by SMART

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