3VTM date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 3ZZ, GOL enzyme
Primary referenceSelective binding of antimicrobial porphyrins to the heme-receptor IsdH-NEAT3 of Staphylococcus aureus., Vu NT, Moriwaki Y, Caaveiro JM, Terada T, Tsutsumi H, Hamachi I, Shimizu K, Tsumoto K, Protein Sci. 2013 Jul;22(7):942-53. doi: 10.1002/pro.2276. Epub 2013 Jun 6. PMID:23649633
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (45 Kb) [Save to disk]
  • Biological Unit Coordinates (3vtm.pdb1.gz) 21 Kb
  • Biological Unit Coordinates (3vtm.pdb2.gz) 21 Kb
  • LPC: Ligand-Protein Contacts for 3VTM
  • CSU: Contacts of Structural Units for 3VTM
  • Structure Factors (376 Kb)
  • Retrieve 3VTM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3VTM from S2C, [Save to disk]
  • Re-refined 3vtm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3VTM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3vtm] [3vtm_A] [3vtm_B]
  • SWISS-PROT database:
  • Domain found in 3VTM: [NEAT ] by SMART

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