3VVU date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceExperimental evidence for the thermophilicity of ancestral life., Akanuma S, Nakajima Y, Yokobori S, Kimura M, Nemoto N, Mase T, Miyazono K, Tanokura M, Yamagishi A, Proc Natl Acad Sci U S A. 2013 Jul 2;110(27):11067-72. doi:, 10.1073/pnas.1308215110. Epub 2013 Jun 17. PMID:23776221
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (93 Kb) [Save to disk]
  • Biological Unit Coordinates (3vvu.pdb1.gz) 262 Kb
  • Biological Unit Coordinates (3vvu.pdb2.gz) 88 Kb
  • CSU: Contacts of Structural Units for 3VVU
  • Structure Factors (256 Kb)
  • Retrieve 3VVU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3VVU from S2C, [Save to disk]
  • Re-refined 3vvu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3VVU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3vvu] [3vvu_A] [3vvu_B]
  • SWISS-PROT database:
  • Domain found in 3VVU: [NDK ] by SMART

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