3W03	Dna Binding Protein	date	Oct 17, 2012
title	Xlf-Xrcc4 Complex
authors	Q.Wu, T.Ochi, D.Matak-Vinkovic, C.V.Robinson, D.Y.Chirgadze, T.L.
compound		source
Molecule: Non-Homologous End-Joining Factor 1 Chain: A, B Fragment: Unp Residues 1-233 Synonym: Protein Cernunnos, Xrcc4-Like Factor Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Nhej1, Xlf Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Dna Repair Protein Xrcc4 Chain: C, D Fragment: Unp Residues 1-164 Synonym: X-Ray Repair Cross-Complementing Protein 4 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Xrcc4 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 65	R_factor 0.363 R_Free 0.360
crystal cell	length a length b length c angle alpha angle beta angle gamma 236.762 236.762 103.229 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	8.49 Å
Gene Ontology	Chain Function Process Component A, B D, C
Primary reference	Non-homologous end-joining partners in a helical dance: structural studies of XLF-XRCC4 interactions., Wu Q, Ochi T, Matak-Vinkovic D, Robinson CV, Chirgadze DY, Blundell TL, Biochem Soc Trans. 2011 Oct;39(5):1387-92, suppl 2 p following 1392. PMID:21936820

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (266 Kb) [Save to disk] Biological Unit Coordinates (3w03.pdb1.gz) 148 Kb Biological Unit Coordinates (3w03.pdb2.gz) 113 Kb CSU: Contacts of Structural Units for 3W03 Structure Factors (23 Kb) Retrieve 3W03 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3W03 from S2C, [Save to disk]

View 3W03 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3W03

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3W03, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3w03_B] [3w03_C] [3w03_D] [3w03_A] [3w03] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3W03

Community annotation for 3W03 at PDBWiki (http://pdbwiki.org)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---