3W1J	Transferase	date	Nov 15, 2012
title	Crystal Structure Of The N-Terminal Truncated Selenocysteine Sela In Complex With Thiosulfate
authors	Y.Itoh, S.Sekine, S.Yokoyama
compound		source
Molecule: L-Seryl-Trna(Sec) Selenium Transferase Chain: A, B, C, D, E, F, G, H, I, J Fragment: The Core And C-Terminal Domains, Unp Residues 62- Synonym: Selenocysteine Synthase, Sec Synthase, Selenocyste Trna(Sec) Synthase; Ec: 2.9.1.1 Engineered: Yes		Organism_scientific: Aquifex Aeolicus Organism_taxid: 224324 Strain: Vf5 Gene: Sela Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Rosetta 2(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet22b
symmetry	Space Group: P 1	R_factor 0.200 R_Free 0.266
crystal cell	length a length b length c angle alpha angle beta angle gamma 92.442 116.372 124.788 102.09 93.39 106.06
method	X-Ray Diffraction	resolution	3.25 Å
ligand	K, LLP, THJ	enzyme	Transferase E.C.2.9.1.1 BRENDA
Gene Ontology	Chain Function Process Component F, A, J, E, B, H, C, D, I, G
Primary reference	Decameric SelA*tRNA(Sec) ring structure reveals mechanism of bacterial selenocysteine formation., Itoh Y, Brocker MJ, Sekine S, Hammond G, Suetsugu S, Soll D, Yokoyama S, Science. 2013 Apr 5;340(6128):75-8. doi: 10.1126/science.1229521. PMID:23559248

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1318 Kb) [Save to disk] Biological Unit Coordinates (3w1j.pdb1.gz) 1306 Kb LPC: Ligand-Protein Contacts for 3W1J CSU: Contacts of Structural Units for 3W1J Structure Factors (587 Kb) Retrieve 3W1J in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3W1J from S2C, [Save to disk] Re-refined 3w1j structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3W1J in 3D

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Visual 3D analysis of 3W1J

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3W1J, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3w1j_J] [3w1j_I] [3w1j_E] [3w1j_H] [3w1j] [3w1j_A] [3w1j_C] [3w1j_G] [3w1j_D] [3w1j_F] [3w1j_B] SWISS-PROT database: Domain organization of by SWISSPFAM

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