3WBG Lipid Binding Protein date May 16, 2013
title Structure Of The Human Heart Fatty Acid-Binding Protein In C With 1-Anilinonaphtalene-8-Sulphonic Acid
authors M.Hirose, S.Sugiyama, H.Ishida, M.Niiyama, D.Matsuoka, T.Hara, F.S E.Mizohata, S.Murakami, T.Inoue, S.Matsuoka, M.Murata
compound source
Molecule: Fatty Acid-Binding Protein, Heart
Chain: A, B, C, D
Synonym: Fatty Acid-Binding Protein 3, Heart-Type Fatty Aci Protein, H-Fabp, Mammary-Derived Growth Inhibitor, Mdgi, Mu Acid-Binding Protein, M-Fabp;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Fabp3
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
symmetry Space Group: C 1 2 1
R_factor 0.218 R_Free 0.291
crystal
cell
length a length b length c angle alpha angle beta angle gamma
127.157 29.359 140.689 90.00 112.47 90.00
method X-Ray Diffractionresolution 2.15 Å
ligand 2AN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B
  • long-chain fatty acid bindin...


    • Primary referenceStructure of the human-heart fatty-acid-binding protein 3 in complex with the fluorescent probe 1-anilinonaphthalene-8-sulphonic acid., Hirose M, Sugiyama S, Ishida H, Niiyama M, Matsuoka D, Hara T, Mizohata E, Murakami S, Inoue T, Matsuoka S, Murata M, J Synchrotron Radiat. 2013 Nov;20(Pt 6):923-8. doi: 10.1107/S0909049513021298., Epub 2013 Oct 1. PMID:24121341
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (93 Kb) [Save to disk]
  • Biological Unit Coordinates (3wbg.pdb1.gz) 24 Kb
  • Biological Unit Coordinates (3wbg.pdb2.gz) 24 Kb
  • Biological Unit Coordinates (3wbg.pdb3.gz) 24 Kb
  • Biological Unit Coordinates (3wbg.pdb4.gz) 23 Kb
  • LPC: Ligand-Protein Contacts for 3WBG
  • CSU: Contacts of Structural Units for 3WBG
  • Structure Factors (569 Kb)
  • Retrieve 3WBG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3WBG from S2C, [Save to disk]
  • Re-refined 3wbg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3WBG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3WBG
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3WBG, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3wbg_D] [3wbg_A] [3wbg] [3wbg_B] [3wbg_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 3WBG
  • Community annotation for 3WBG at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science