3WD1	Hydrolase Hydrolase Inhibitor	date	Jun 06, 2013
title	Serratia Marcescens Chitinase B Complexed With Syn-Triazole
authors	T.Hirose, N.Maita, H.Gouda, J.Koseki, T.Yamamoto, A.Sugawara, H.Na S.Hirono, K.Shiomi, T.Watanabe, H.Taniguchi, K.B.Sharpless, S.Om T.Sunazuka
compound		source
Molecule: Chitinase B Chain: A Ec: 3.2.1.14 Engineered: Yes		Organism_scientific: Serratia Marcescens Organism_taxid: 615 Gene: Chib Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Dh5a Expression_system_vector_type: Plasmid Expression_system_plasmid: Ptrchis B
symmetry	Space Group: P 43 21 2	R_factor 0.186 R_Free 0.226
crystal cell	length a length b length c angle alpha angle beta angle gamma 97.768 97.768 197.757 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.30 Å
ligand	GOL, PO3, SO4, ST7	enzyme	Hydrolase E.C.3.2.1.14 BRENDA
Gene Ontology	Chain Function Process Component A

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (90 Kb) [Save to disk] Biological Unit Coordinates (3wd1.pdb1.gz) 84 Kb Biological Unit Coordinates (3wd1.pdb2.gz) 165 Kb LPC: Ligand-Protein Contacts for 3WD1 CSU: Contacts of Structural Units for 3WD1 Structure Factors (612 Kb) Retrieve 3WD1 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3WD1 from S2C, [Save to disk] Re-refined 3wd1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3WD1 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3WD1

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3WD1, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1f3wd1, region D:116-217 [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3wd1_A] [3wd1] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 3WD1: [ChtBD3] [Glyco_18 ] by SMART

Other resources with information on 3WD1

Community annotation for 3WD1 at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---