3WDZ date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand SEP enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referencePhosphorylation of p62 activates the Keap1-Nrf2 pathway during selective autophagy., Ichimura Y, Waguri S, Sou YS, Kageyama S, Hasegawa J, Ishimura R, Saito T, Yang Y, Kouno T, Fukutomi T, Hoshii T, Hirao A, Takagi K, Mizushima T, Motohashi H, Lee MS, Yoshimori T, Tanaka K, Yamamoto M, Komatsu M, Mol Cell. 2013 Sep 12;51(5):618-31. doi: 10.1016/j.molcel.2013.08.003. Epub 2013 , Sep 5. PMID:24011591
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk]
  • Biological Unit Coordinates (3wdz.pdb1.gz) 46 Kb
  • LPC: Ligand-Protein Contacts for 3WDZ
  • CSU: Contacts of Structural Units for 3WDZ
  • Structure Factors (163 Kb)
  • Retrieve 3WDZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3WDZ from S2C, [Save to disk]
  • Re-refined 3wdz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3WDZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3wdz] [3wdz_A] [3wdz_B]
  • SWISS-PROT database:
  • Domain found in 3WDZ: [Kelch ] by SMART

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