OCA Atlas for 3WN6

3WN6

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

CA, GOL, PEG, TAR

enzyme

Gene
Ontology

Chain	Function	Process	Component
D, A, C, B

Primary reference

Crystal structure of alpha-amylase from Oryza sativa: molecular insights into enzyme activity and thermostability., Ochiai A, Sugai H, Harada K, Tanaka S, Ishiyama Y, Ito K, Tanaka T, Uchiumi T, Taniguchi M, Mitsui T, Biosci Biotechnol Biochem. 2014;78(6):989-97. doi: 10.1080/09168451.2014.917261. , Epub 2014 Jun 18. PMID:25036124

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (298 Kb) [Save to disk]

Biological Unit Coordinates (3wn6.pdb1.gz) 76 Kb

Biological Unit Coordinates (3wn6.pdb2.gz) 78 Kb

Biological Unit Coordinates (3wn6.pdb3.gz) 76 Kb

Biological Unit Coordinates (3wn6.pdb4.gz) 77 Kb

LPC: Ligand-Protein Contacts for 3WN6

CSU: Contacts of Structural Units for 3WN6

Structure Factors (1749 Kb)

Retrieve 3WN6 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3WN6 from S2C, [Save to disk]

Re-refined 3wn6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3WN6 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3wn6] [3wn6_A] [3wn6_B] [3wn6_C] [3wn6_D]

SWISS-PROT database:

Domains found in 3WN6: [Aamy] [Alpha-amyl_C2 ] by SMART

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