3WVL Hydrolase date May 23, 2014
title Crystal Structure Of The Football-Shaped Groel-Groes Complex Groes2:Atp14) From Escherichia Coli
authors A.Koike-Takeshita, T.Arakawa, H.Taguchi, T.Shimamura
compound source
Molecule: 60 Kda Chaperonin
Chain: A, B, C, D, E, F, G, H, I, J, K, L, M, N
Synonym: Groel Protein, Protein Cpn60
Ec: 3.6.4.9
Engineered: Yes
Mutation: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 83333
Strain: K12
Gene: Grol, Groel, Mopa, B4143, Jw4103
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: 10 Kda Chaperonin
Chain: O, P, Q, R, S, T, U, V, W, X, Y, Z, a, b
Synonym: Groes Protein, Protein Cpn10
Ec: 3.6.4.9
Engineered: Yes

Organism_scientific: Escherichia Coli
Organism_taxid: 83333
Strain: K12
Gene: Gros, Groes, Mopb, B4142, Jw4102
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.211 R_Free 0.250
crystal
cell
length a length b length c angle alpha angle beta angle gamma
160.280 217.117 198.481 90.00 98.02 90.00
method X-Ray Diffractionresolution 3.79 Å
ligand ATP, K, MG enzyme Hydrolase E.C.3.6.4.9 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


F, N, K, E, M, C, L, J, H, D, I, G


S, T, Y, V, Z, Q, O, W, X, P, R, U


a, b


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (2864 Kb) [Save to disk]
  • Biological Unit Coordinates (3wvl.pdb1.gz) 1431 Kb
  • Biological Unit Coordinates (3wvl.pdb2.gz) 1427 Kb
  • LPC: Ligand-Protein Contacts for 3WVL
  • CSU: Contacts of Structural Units for 3WVL
  • Structure Factors (833 Kb)
  • Retrieve 3WVL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3WVL from S2C, [Save to disk]
  • Re-refined 3wvl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3WVL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3WVL
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3WVL, from MSDmotif at EBI
  • Fold representative 3wvl from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3wvl_R] [3wvl_C] [3wvl_L] [3wvl_B] [3wvl_K] [3wvl_J] [3wvl_O] [3wvl_I] [3wvl_Y] [3wvl_X] [3wvl_H] [3wvl_N] [3wvl_E] [3wvl_M] [3wvl_S] [3wvl_V] [3wvl_Q] [3wvl] [3wvl_P] [3wvl_T] [3wvl_F] [3wvl_W] [3wvl_A] [3wvl_b] [3wvl_D] [3wvl_Z] [3wvl_G] [3wvl_a] [3wvl_U]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3WVL: [Cpn10 ] by SMART
  • Other resources with information on 3WVL
  • Community annotation for 3WVL at PDBWiki (http://pdbwiki.org)

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