3ZDM date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceStructure of the Sgt2 dimerization domain complexed with the Get5 UBL domain involved in the targeting of tail-anchored membrane proteins to the endoplasmic reticulum., Tung JY, Li YC, Lin TW, Hsiao CD, Acta Crystallogr D Biol Crystallogr. 2013 Oct 1;69(Pt 10):2081-2090. Epub 2013, Sep 20. PMID:24100326
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (150 Kb) [Save to disk]
  • Biological Unit Coordinates (3zdm.pdb1.gz) 141 Kb
  • CSU: Contacts of Structural Units for 3ZDM
  • Structure Factors (698 Kb)
  • Retrieve 3ZDM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3ZDM from S2C, [Save to disk]
  • Re-refined 3zdm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3ZDM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3zdm] [3zdm_A] [3zdm_B] [3zdm_C] [3zdm_D] [3zdm_E] [3zdm_F]
  • SWISS-PROT database:
  • Domain found in 3ZDM: [UBQ ] by SMART

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