3ZDU	Transferase	date	Nov 30, 2012
title	Crystal Structure Of The Human Cdkl3 Kinase Domain
authors	P.Canning, J.M.Elkins, S.Goubin, P.Mahajan, A.C.W.Pike, A.Quigley A.Mackenzie, E.P.Carpenter, F.Von Delft, C.H.Arrowsmith, A.M.Ed C.Bountra, A.Bullock
compound		source
Molecule: Cyclin-Dependent Kinase-Like 3 Chain: A Fragment: Kinase Domain, Residues 1-324 Synonym: Serinethreonine-Protein Kinase Nkiamre Ec: 2.7.11.22 Engineered: Yes Mutation: Yes Other_details: Two Phosphomimetic Point Mutations Introduce And Y160e		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108 Expression_system_cell_line: Sf9 Expression_system_vector_type: Baculovirus Expression_system_plasmid: Pfb-Lic-Bse Other_details: Site-Directed Mutagenesis
symmetry	Space Group: P 31 2 1	R_factor 0.214 R_Free 0.262
crystal cell	length a length b length c angle alpha angle beta angle gamma 63.930 63.930 163.630 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.20 Å
ligand	38R, EDO, NA, ZN	enzyme	Transferase E.C.2.7.11.22 BRENDA
Gene Ontology	Chain Function Process Component A

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (110 Kb) [Save to disk] Biological Unit Coordinates (3zdu.pdb1.gz) 199 Kb LPC: Ligand-Protein Contacts for 3ZDU CSU: Contacts of Structural Units for 3ZDU Structure Factors (739 Kb) Retrieve 3ZDU in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3ZDU from S2C, [Save to disk] Re-refined 3zdu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3ZDU in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3ZDU

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3ZDU, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3zdu_A] [3zdu] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3ZDU: [S_TKc ] by SMART

Other resources with information on 3ZDU

Community annotation for 3ZDU at PDBWiki (http://pdbwiki.org)

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