3ZGQ	Immune System	date	Dec 19, 2012
title	Crystal Structure Of Human Interferon-Induced Protein Ifit5
authors	G.E.Katibah, H.J.Lee, J.P.Huizar, J.M.Vogan, T.Alber, K.Collins
compound		source
Molecule: Interferon-Induced Protein With Tetratricopeptide 5; Chain: A Synonym: Ifit-5, Interferon-Induced 58 Kda Protein, Retinoi And Interferon-Inducible 58 Kda Protein, P58; Engineered: Yes Other_details: Residues 190-195 Are Disordered		Organism_scientific: Homo Sapiens Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_variant: Rosetta
symmetry	Space Group: P 21 21 21	R_factor 0.1778 R_Free 0.2398
crystal cell	length a length b length c angle alpha angle beta angle gamma 63.833 71.793 116.920 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.20 Å
ligand	PEG	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	tRNA Binding, Structure, and Localization of the Human Interferon-Induced Protein IFIT5., Katibah GE, Lee HJ, Huizar JP, Vogan JM, Alber T, Collins K, Mol Cell. 2013 Feb 21;49(4):743-50. doi: 10.1016/j.molcel.2012.12.015. Epub 2013 , Jan 11. PMID:23317505

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (172 Kb) [Save to disk] Biological Unit Coordinates (3zgq.pdb1.gz) 166 Kb LPC: Ligand-Protein Contacts for 3ZGQ CSU: Contacts of Structural Units for 3ZGQ Structure Factors (184 Kb) Retrieve 3ZGQ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3ZGQ from S2C, [Save to disk] Re-refined 3zgq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3ZGQ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3ZGQ

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3ZGQ, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3zgq] [3zgq_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3ZGQ: [TPR ] by SMART

Other resources with information on 3ZGQ

Community annotation for 3ZGQ at PDBWiki (http://pdbwiki.org)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---