3ZL2 Cell Adhesion date Jan 27, 2013
title A Thiazolyl-Mannoside Bound To Fimh, Orthorhombic Space Grou
authors S.Brument, A.Sivignon, T.I.Dumych, N.Moreau, G.Roos, Y.Guerardel, T.Chalopin, D.Deniaud, R.O.Bilyy, A.Darfeuille-Michaud, J.Bouck S.G.Gouin
compound source
Molecule: Protein Fimh
Chain: A
Fragment: Lectin Domain Or Receptor Binding Domain, Residue
Engineered: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 1206108
Strain: J96
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_variant: C43
Expression_system_vector_type: Plasmid
Expression_system_vector: Pet24a
symmetry Space Group: P 21 21 2
R_factor 0.168 R_Free 0.188
crystal
cell
length a length b length c angle alpha angle beta angle gamma
69.460 95.050 28.490 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.25 Å
ligand BWG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThiazolylaminomannosides As Potent Antiadhesives of Type 1 Piliated Escherichia coli Isolated from Crohn's Disease Patients., Brument S, Sivignon A, Dumych TI, Moreau N, Roos G, Guerardel Y, Chalopin T, Deniaud D, Bilyy RO, Darfeuille-Michaud A, Bouckaert J, Gouin SG, J Med Chem. 2013 Jun 24. PMID:23795713
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk]
  • Biological Unit Coordinates (3zl2.pdb1.gz) 54 Kb
  • LPC: Ligand-Protein Contacts for 3ZL2
  • CSU: Contacts of Structural Units for 3ZL2
  • Structure Factors (835 Kb)
  • Retrieve 3ZL2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3ZL2 from S2C, [Save to disk]
  • Re-refined 3zl2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3ZL2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3ZL2
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3ZL2, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3zl2] [3zl2_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3ZL2
  • Community annotation for 3ZL2 at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science