3ZLJ	Dna Binding Protein Dna	date	Feb 01, 2013
title	Crystal Structure Of Full-Length E.Coli Dna Mismatch Repair Muts D835r Mutant In Complex With Gt Mismatched Dna
authors	F.S.Groothuizen, A.Fish, M.V.Petoukhov, A.Reumer, L.Manelyte, H.H.K.Winterwerp, M.G.Marinus, J.H.G.Lebbink, D.I.Svergun, P.Fr T.K.Sixma
compound		source
Molecule: Dna Mismatch Repair Protein Muts Chain: A, B Engineered: Yes Mutation: Yes		Organism_scientific: Escherichia Coli K-12 Organism_taxid: 83333 Expression_system: Escherichia Coli B Expression_system_taxid: 37762 Expression_system_strain: B834(De3) Expression_system_variant: Plyss Expression_system_vector_type: Plasmid Expression_system_vector: Pet3d
Molecule: Dna Mismatch Repair Protein Muts Chain: C, D Engineered: Yes Mutation: Yes Other_details: Chains C And D Are The C-Terminal Portion Of And B, However The Missing Region 800-822 Makes Unambiguous Assignment To The Correct Chain Impossible;		Organism_scientific: Escherichia Coli K-12 Organism_taxid: 83333 Expression_system: Escherichia Coli B Expression_system_taxid: 37762 Expression_system_strain: B834(De3) Expression_system_variant: Plyss Expression_system_vector_type: Plasmid Expression_system_vector: Pet3d
Molecule: 5'-D(Apgpcptpgpcpcpapgpgpcpapcpcp Apgptpgptpcpap)-3'; Chain: E Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630
Molecule: 5'-D(Tpgpapcpapcptpgpgptpgpcptptp Gpgpcpapgpcptp)-3'; Chain: F Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630
symmetry	Space Group: P 1 21 1	R_factor 0.227 R_Free 0.263
crystal cell	length a length b length c angle alpha angle beta angle gamma 110.288 91.152 112.855 90.00 101.79 90.00
method	X-Ray Diffraction	resolution	3.10 Å
Gene Ontology	Chain Function Process Component A, B
Primary reference	Using stable MutS dimers and tetramers to quantitatively analyze DNA mismatch recognition and sliding clamp formation., Groothuizen FS, Fish A, Petoukhov MV, Reumer A, Manelyte L, Winterwerp HH, Marinus MG, Lebbink JH, Svergun DI, Friedhoff P, Sixma TK, Nucleic Acids Res. 2013 Jul 1. PMID:23821665

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (551 Kb) [Save to disk] Biological Unit Coordinates (3zlj.pdb1.gz) 522 Kb Biological Unit Coordinates (3zlj.pdb2.gz) 25 Kb CSU: Contacts of Structural Units for 3ZLJ Structure Factors (510 Kb) Retrieve 3ZLJ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3ZLJ from S2C, [Save to disk] Re-refined 3zlj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3ZLJ in 3D

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Visual 3D analysis of 3ZLJ

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3ZLJ, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3zlj_C] [3zlj_B] [3zlj_F] [3zlj_D] [3zlj] [3zlj_A] [3zlj_E] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 3ZLJ: [MUTSac] [MUTSd ] by SMART

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