3ZP0 INFLUENZA VIRUS (VN1194) H5 HA with LSTa date
authors Liu, J., Stevens, D.J., Gamblin, S.J., Skehel, J.J.
compound source
symmetry
R_factor
R_Free 0.28520
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.51
ligand GAL, NAG, SIA enzyme
Gene
Ontology
ChainFunctionProcessComponent
E


F


Primary referenceChanges in the hemagglutinin of H5N1 viruses during human infection - Influence on receptor binding., Crusat M, Liu J, Palma AS, Childs RA, Liu Y, Wharton SA, Lin YP, Coombs PJ, Martin SR, Matrosovich M, Chen Z, Stevens DJ, Hien VM, Thanh TT, Nhu LN, Nguyet LA, Ha DQ, van Doorn HR, Hien TT, Conradt HS, Kiso M, Gamblin SJ, Chai W, Skehel JJ, Hay AJ, Farrar J, de Jong MD, Feizi T, Virology. 2013 Sep 17. pii: S0042-6822(13)00481-9. doi:, 10.1016/j.virol.2013.08.010. PMID:24050651
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (166 Kb) [Save to disk]
  • Biological Unit Coordinates (3zp0.pdb1.gz) 473 Kb
  • LPC: Ligand-Protein Contacts for 3ZP0
  • CSU: Contacts of Structural Units for 3ZP0
  • Structure Factors (228 Kb)
  • Retrieve 3ZP0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3ZP0 from S2C, [Save to disk]
  • Re-refined 3zp0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3ZP0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3ZP0
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3ZP0, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3zp0_F] [3zp0] [3zp0_E]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3ZP0
  • Community annotation for 3ZP0 at PDBWiki (http://pdbwiki.org)

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