3ZZE	Transferase	date	Aug 31, 2011
title	Crystal Structure Of C-Met Kinase Domain In Complex With N'- Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-Ylidene)-2-(4- Hydroxyphenyl)Propanohydrazide
authors	M.Mctigue, Y.Deng, K.Ryan, J.J.Cui
compound		source
Molecule: Hepatocyte Growth Factor Receptor Chain: A Fragment: Tyrosine Kinase Domain, Unp Residues 1051-1348 Synonym: Hgf Receptor, Hgfsf Receptor, Proto-Oncogene C-Me Factor Receptor, Sf Receptor, Tyrosine-Protein Kinase Met; Ec: 2.7.10.1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108 Expression_system_cell_line: Sf9 Expression_system_vector_type: Baculovirus Expression_system_plasmid: Pfastbac1
symmetry	Space Group: P 21 21 2	R_factor 0.196 R_Free 0.226
crystal cell	length a length b length c angle alpha angle beta angle gamma 76.864 94.373 45.766 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.87 Å
ligand	6XP	enzyme	Transferase E.C.2.7.10.1 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Discovery of a Novel Class of Exquisitely Selective Mesenchymal-Epithelial Transition Factor (c-MET) Protein Kinase Inhibitors and Identification of the Clinical Candidate 2-(4-(1-(Quinolin-6-ylmethyl)-1H-[1,2,3]triazolo[4,5-b]pyrazin-6-yl)-1H-pyrazol-1 -yl)ethanol (PF-04217903) for the Treatment of Cancer., Cui JJ, McTigue M, Nambu M, Tran-Dube M, Pairish M, Shen H, Jia L, Cheng H, Hoffman J, Le P, Jalaie M, Goetz GH, Ryan K, Grodsky N, Deng YL, Parker M, Timofeevski S, Murray BW, Yamazaki S, Aguirre S, Li Q, Zou H, Christensen J, J Med Chem. 2012 Sep 10. PMID:22924734

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (56 Kb) [Save to disk] Biological Unit Coordinates (3zze.pdb1.gz) 51 Kb LPC: Ligand-Protein Contacts for 3ZZE CSU: Contacts of Structural Units for 3ZZE Structure Factors (256 Kb) Retrieve 3ZZE in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3ZZE from S2C, [Save to disk] Re-refined 3zze structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3ZZE in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3ZZE

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3ZZE, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3zze] [3zze_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3ZZE: [TyrKc ] by SMART

Other resources with information on 3ZZE

Community annotation for 3ZZE at PDBWiki (http://pdbwiki.org)

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