3LPK Structure of BACE Bound to SCH747123 date
authors Strickland, C., Cumming, J.
compound source
symmetry
R_factor
R_Free 0.230
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.93
ligand TLA, Z76 BindingDB enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referencePiperazine sulfonamide BACE1 inhibitors: Design, synthesis, and in vivo characterization., Cumming J, Babu S, Huang Y, Carrol C, Chen X, Favreau L, Greenlee W, Guo T, Kennedy M, Kuvelkar R, Le T, Li G, McHugh N, Orth P, Ozgur L, Parker E, Saionz K, Stamford A, Strickland C, Tadesse D, Voigt J, Zhang L, Zhang Q, Bioorg Med Chem Lett. 2010 Mar 12. PMID:20347593
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (150 Kb) [Save to disk]
  • Biological Unit Coordinates (3lpk.pdb1.gz) 144 Kb
  • Biological Unit Coordinates (3lpk.pdb2.gz) 75 Kb
  • Biological Unit Coordinates (3lpk.pdb3.gz) 73 Kb
  • LPC: Ligand-Protein Contacts for 3LPK
  • CSU: Contacts of Structural Units for 3LPK
  • Structure Factors (1269 Kb)
  • Retrieve 3LPK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3LPK from S2C, [Save to disk]
  • Re-refined 3lpk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3LPK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3LPK
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3LPK, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3lpk] [3lpk_B] [3lpk_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 3LPK
  • Community annotation for 3LPK at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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