3NJO Hormone Receptor date Jun 17, 2010
title X-Ray Crystal Structure Of The Pyr1-Pyrabactin A Complex
authors E.S.Burgie, C.A.Bingman, G.N.Phillips Jr., F.C.Peterson, B.F.Vol S.R.Cutler, D.R.Jensen, Center For Eukaryotic Structural Geno (Cesg)
compound source
Molecule: Abscisic Acid Receptor Pyr1
Chain: A, B, C
Synonym: Protein Pyrabactin Resistance 1, Abi1-Binding Prot Regulatory Components Of Aba Receptor 11;
Engineered: Yes
Mutation: Yes
Organism_scientific: Arabidopsis Thaliana
Organism_common: Thale-Cress
Organism_taxid: 3702
Strain: Columbia
Gene: Abip6, At4g17870, Pyr1, Rcar11, T6k21.50
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28a
symmetry Space Group: P 61 2 2
R_factor 0.222 R_Free 0.265
length a length b length c angle alpha angle beta angle gamma
60.307 60.307 527.599 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.47 Å
ligand CL, NA, P2M, PYV, SO4 enzyme
A, C, B
  • protein phosphatase inhibito...

  • Primary referenceStructural basis for selective activation of ABA receptors., Peterson FC, Burgie ES, Park SY, Jensen DR, Weiner JJ, Bingman CA, Chang CE, Cutler SR, Phillips GN Jr, Volkman BF, Nat Struct Mol Biol. 2010 Sep;17(9):1109-13. Epub 2010 Aug 22. PMID:20729860
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (186 Kb) [Save to disk]
  • Biological Unit Coordinates (3njo.pdb1.gz) 119 Kb
  • Biological Unit Coordinates (3njo.pdb2.gz) 121 Kb
  • LPC: Ligand-Protein Contacts for 3NJO
  • CSU: Contacts of Structural Units for 3NJO
  • Structure Factors (266 Kb)
  • Retrieve 3NJO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3NJO from S2C, [Save to disk]
  • Re-refined 3njo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3NJO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3NJO
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3NJO, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3njo_B] [3njo_C] [3njo] [3njo_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3NJO
  • Community annotation for 3NJO at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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