3U1Y date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 03I, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referencePotent Inhibitors of LpxC for the Treatment of Gram-Negative Infections., Brown MF, Reilly U, Abramite JA, Arcari JT, Oliver R, Barham RA, Che Y, Chen JM, Collantes EM, Chung SW, Desbonnet C, Doty J, Doroski M, Engtrakul JJ, Harris TM, Huband M, Knafels J, Leach KL, Liu S, Marfat A, Marra A, McElroy E, Melnick M, Menard CA, Montgomery JI, Mulllins L, Noe MC, O'Donnell J, Penzien J, Plummer MS, Price LM, Shanmugasundaram V, Thoma C, Uccello D, Warmus J, Wishka DG, J Med Chem. 2011 Dec 18. PMID:22175825
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (200 Kb) [Save to disk]
  • Biological Unit Coordinates (3u1y.pdb1.gz) 99 Kb
  • Biological Unit Coordinates (3u1y.pdb2.gz) 99 Kb
  • Biological Unit Coordinates (3u1y.pdb3.gz) 196 Kb
  • LPC: Ligand-Protein Contacts for 3U1Y
  • CSU: Contacts of Structural Units for 3U1Y
  • Structure Factors (791 Kb)
  • Retrieve 3U1Y in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3U1Y from S2C, [Save to disk]
  • Re-refined 3u1y structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3U1Y in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3U1Y
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3U1Y, from MSDmotif at EBI
  • Fold representative 3u1y from FSSP and Dali (Families of Structurally Similar Proteins)
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3u1y] [3u1y_A] [3u1y_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 3U1Y
  • Community annotation for 3U1Y at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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