3U8M	Crystal structure of the acetylcholine binding protein (AChBP) from Lymnaea stagnalis in complex with NS3920 (1-(6-bromopyridin-3-yl)-1,4-diazepane)	date
authors	Rohde, L.A.H., Ahring, P.K., Jensen, M.L., Nielsen, E.O., Peters, D., Helgstrand, C., Krintel, C., Harpsoe, K., Gajhede, M., Kastrup, J.S., Balle, T.
compound		source
symmetry		R_factor R_Free 0.275
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.70
ligand	09R, SO4 BindingDB	enzyme
Gene Ontology	Chain Function Process Component S, F, T, N, K, E, Q, M, C, L, A, J, O, P, B, H, D, R, I, G
Primary reference	Intersubunit bridge formation governs agonist efficacy at nicotinic acetylcholine alpha4beta2 receptors: unique role of halogen bonding revealed., Rohde LA, Ahring PK, Jensen ML, Nielsen EO, Peters D, Helgstrand C, Krintel C, Harpsoe K, Gajhede M, Kastrup JS, Balle T, J Biol Chem. 2012 Feb 3;287(6):4248-59. Epub 2011 Dec 13. PMID:22170047

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1297 Kb) [Save to disk] Biological Unit Coordinates (3u8m.pdb1.gz) 326 Kb Biological Unit Coordinates (3u8m.pdb2.gz) 297 Kb Biological Unit Coordinates (3u8m.pdb3.gz) 327 Kb Biological Unit Coordinates (3u8m.pdb4.gz) 325 Kb LPC: Ligand-Protein Contacts for 3U8M CSU: Contacts of Structural Units for 3U8M Structure Factors (6927 Kb) Retrieve 3U8M in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3U8M from S2C, [Save to disk] Re-refined 3u8m structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3U8M in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3U8M

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 3U8M, from MSDmotif at EBI Fold representative 3u8m from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3u8m_S] [3u8m_I] [3u8m_K] [3u8m_P] [3u8m_L] [3u8m_C] [3u8m_T] [3u8m_O] [3u8m_J] [3u8m_E] [3u8m] [3u8m_N] [3u8m_R] [3u8m_M] [3u8m_F] [3u8m_G] [3u8m_Q] [3u8m_D] [3u8m_B] [3u8m_A] [3u8m_H] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3U8M

Community annotation for 3U8M at PDBWiki (http://pdbwiki.org)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

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